Profile

Hi, I'm Xingyu Pan, Estrella online. I'm a postdoctoral researcher in the Pediatric Cancer Metabolism group (Morscher Lab) at the University Children's Hospital Zurich, where I build software and methods for single-cell metabolomics and mass spectrometry, including SCMeTA and LEAF. Before Zurich I did my BSc and PhD in Chemistry at Tsinghua University.

When I'm not at my desk, I'm usually loading a roll of film into a camera somewhere.

cat education.md

  1. 2024.11 – now

    Postdoctoral researcher

    University Children's Hospital Zurich

    Pediatric Cancer Metabolism · Morscher Lab

  2. 2018.09 – 2024.06

    PhD, Chemistry

    Tsinghua University

    Department of Chemistry, Beijing

  3. 2014.09 – 2018.06

    BSc, Chemistry

    Tsinghua University

    Department of Chemistry, Beijing

ls publications/ orcid scholar

Filter publications

2026

  1. LEAF

    Xingyu Pan

    Zenodo software · sole author

2025

  1. A Tandem Cytometry Platform for Single-Cell Analysis of Protein and Metabolites

    Murong Du, Xingyu Pan, Yamei Peng, Jinlei Yang, Siyuan Pan, Runsong Cheng, Shu Yang, Zhenli Yang, Jianzhang Pan, Peng Liu, Sichun Zhang, Xinrong Zhang

    Analytical Chemistry 97(13), 6962–6966

  2. High-throughput single-cell metabolites profiling reveals metabolic reprogramming confers cisplatin resistance in lung cancer

    Changyi Liu, Siyuan Pan, Xingyu Pan, Jinlei Yang, Huan Yao, Zhenli Yang, Sijia Hao, Yuqin Liu, Peng Liu, Sichun Zhang

    Talanta 285, 127355

2024

  1. SCMeTA: a pipeline for single-cell metabolic analysis data processing

    Xingyu Pan, Siyuan Pan, Murong Du, Jinlei Yang, Huan Yao, Xinrong Zhang, Sichun Zhang

    Bioinformatics 40(9), btae545 first author

  2. High-Throughput Metabolite Analysis of Unicellular Microalgae by Orthogonal Hybrid Ionization Label-Free Mass Cytometry

    Huan Yao, Jinlei Yang, Zhengmao Wang, Xingyu Pan, Junmin Pan, Hongmei Li, Sichun Zhang

    Analytical Chemistry 96(28), 11404–11411

  3. Single-Cell Unsaturated Lipid Profiling for Studying Chemoresistance Heterogeneity of Triple-Negative Breast Cancer Cells

    Jinlei Yang, Runsong Cheng, Xingyu Pan, Siyuan Pan, Murong Du, Huan Yao, Zhian Hu, Sichun Zhang, Xinrong Zhang

    Analytical Chemistry

  4. Single-cell metabolite profiling enables information-rich classification of lymphocyte types and subtypes

    Siyuan Pan, Changyi Liu, Huan Yao, Xingyu Pan, Jinhang Li, Jinlei Yang, Murong Du, Peng Liu, Sichun Zhang, Xinrong Zhang

    Chemical Communications 60(4), 392–395

2022

  1. Recent progress in mass spectrometry for single-cell metabolomics

    Xingyu Pan, Huan Yao, Sichun Zhang, Xinrong Zhang

    Current Opinion in Chemical Biology 71, 102226 review · first author

  2. The heterogeneity of oxidized lipids in individual tumor cells reveals NK cell-mediated cytotoxicity by label-free mass cytometry

    Zizheng Shen, Huan Yao, Jinlei Yang, Xingyu Pan, Hansen Zhao, Guojun Han, Sichun Zhang, Xinrong Zhang

    Analyst 147(24), 5754–5763

  3. Dynamic metabolic change of cancer cells induced by natural killer cells at the single-cell level studied by label-free mass cytometry

    Zizheng Shen, Hansen Zhao, Huan Yao, Xingyu Pan, Jinlei Yang, Sichun Zhang, Guojun Han, Xinrong Zhang

    Chemical Science 13(6), 1641–1647

  4. Rapid quantitative analysis of hormones in serum by multilayer paper spray MS: Free MS from HPLC

    Tianhao Wu, Gongwei Sun, Mingying Ma, Xingyu Pan, Sichun Zhang, Xinrong Zhang

    Talanta 237, 122900

2021

  1. Site-Specific Scissors Based on Myeloperoxidase for Phosphorothioate DNA

    Zhian Hu, Jinlei Yang, Fujian Xu, Gongwei Sun, Xingyu Pan, Mengchan Xia, Sichun Zhang, Xinrong Zhang

    Journal of the American Chemical Society 143(31), 12361–12368

  2. Discriminating Leukemia Cellular Heterogeneity and Screening Metabolite Biomarker Candidates using Label-Free Mass Cytometry

    Huan Yao, Hansen Zhao, Xingyu Pan, Xu Zhao, Jiaxin Feng, Chengdui Yang, Sichun Zhang, Xinrong Zhang

    Analytical Chemistry 93(29), 10282–10291

2019

  1. Label-free Mass Cytometry for Unveiling Cellular Metabolic Heterogeneity

    Huan Yao, Hansen Zhao, Xu Zhao, Xingyu Pan, Jiaxin Feng, Fujian Xu, Sichun Zhang, Xinrong Zhang

    Analytical Chemistry 91(15), 9777–9783

  2. Chemical-Modified Nucleotide-Based Elemental Tags for High-Sensitive Immunoassay

    Zhian Hu, Gongwei Sun, Wencan Jiang, Fujian Xu, Yuqing Zhang, Mengchan Xia, Xingyu Pan, Zhi Xing, Sichun Zhang, Xinrong Zhang

    Analytical Chemistry 91(9), 5980–5986

2018

  1. Combination of Droplet Extraction and Pico-ESI-MS Allows the Identification of Metabolites from Single Cancer Cells

    Xiao-Chao Zhang, Qingce Zang, Hansen Zhao, Xiaoxiao Ma, Xingyu Pan, Jiaxin Feng, Sichun Zhang, Ruiping Zhang, Zeper Abliz, Xinrong Zhang

    Analytical Chemistry 90(16), 9897–9903

cat skills.txt

languages

  • Python
  • TypeScript / JavaScript
  • R
  • Rust
  • SQL

tools & frameworks

  • Vue 3 / Astro
  • FastAPI / Pydantic
  • Bioinformatics pipelines
  • Docker / Nix
  • PostgreSQL / DuckDB

domains

  • Computational biology
  • Metabolomics
  • Single-cell analysis
  • Data visualization
  • Film photography

cat contact.json

{
  "email": "[email protected]",
  "orcid": "https://orcid.org/0009-0002-6704-2224",
  "scholar": "https://scholar.google.com/citations?user=A4pL4bsAAAAJ",
  "github": "https://github.com/EstrellaXD",
  "blog": "https://blog.estrella.cloud"
}

echo $STATUS

[ok] available for collaboration and interesting projects